CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra83611
(
Phytophthora ramorum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Phyra83611
T126288_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra83611
C2H2 ZF
265
288
FACTQCERSFKSAQGLRTHVHMVH
Phyra83611
C2H2 ZF
300
323
LPCEFCERTFKKEDARRQHQLAKH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora ramorum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-pir_contig_1318-snap-gene-0.5
Pythium irregulare
maker-pir_contig_1318-snap-gene-0.5
N
0.792
fgenesh_masked-piw_contig_780-abinit-gene-0.21
Pythium iwayamai
fgenesh_masked-piw_contig_780-abinit-gene-0.21
N
0.787
fgenesh_scip_prom.28083.1131
Phytophthora lateralis
fgenesh_scip_prom.28083.1131
N
0.779
HpaG802340
Hyaloperonospora arabidopsidis
HpaG802340
N
0.767