CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Physo136109
(
Phytophthora sojae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Physo136109
T126311_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Physo136109
C2H2 ZF
16
40
FACPVPLCGGRFHRKFTLHEHMKTH
Physo136109
C2H2 ZF
46
70
HQCPIKSCGKRFSTSGNLARHKRLH
Physo136109
C2H2 ZF
75
99
MECPVPGCTRIFTSKDMLAKHQKVH
Physo136109
C2H2 ZF
105
130
HTCVVGGCGKTFSTAGNLTRHMKTQH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora sojae
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phyra73536
Phytophthora ramorum
Phyra73536
N
0.827
fgenesh_scip_prom.28083.10132
Phytophthora lateralis
fgenesh_scip_prom.28083.10132
N
0.827
F443_15487
Phytophthora parasitica
F443_15487
N
0.824
maker-pve_contig_328-snap-gene-0.22
Pythium vexans
maker-pve_contig_328-snap-gene-0.22
N
0.806
fgenesh_scip_prom.46568.1920
Phytophthora kernoviae
fgenesh_scip_prom.46568.1920
N
0.802
PITG_17894
Phytophthora infestans
PITG_17894
N
0.769