CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ppa-mnm-2
(
Pristionchus pacificus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PPA00393
T126967_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA00393
C2H2 ZF
164
183
YRCDICEKTFSRSNTLITHK
Links
Other
C2H2 ZF
family TFs
Other
Pristionchus pacificus
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc08309
Meloidogyne incognita
Minc08309
N
0.788
L898_g4201
Steinernema monticolum
L898_g4201
N
0.788
ALUE_0001871001
Ascaris lumbricoides
ALUE_0001871001
N
0.788
Minc11300
Meloidogyne incognita
Minc11300
N
0.788
NECAME_09891
Necator americanus
NECAME_09891
N
0.776
ANCDUO_22737
Ancylostoma duodenale
ANCDUO_22737
N
0.776
ANCCAN_28131
Ancylostoma caninum
ANCCAN_28131
N
0.776
TCLT_0000299601
Thelazia callipaeda
TCLT_0000299601
N
0.768
snap_masked-nMf.1.1.scaf04227-processed-gene-0.3
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf04227-processed-gene-0.3
N
0.759