CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ppa-ztf-16
(
Pristionchus pacificus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PPA01432
T126974_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA01432
C2H2 ZF
22
44
YQCDICHMQFSQKANMHRHRMRH
PPA01432
C2H2 ZF
50
72
YECRYCKKRFFRKDQMQEHSMTH
PPA01432
C2H2 ZF
79
105
FDCPVQGCSLQFGQHSVLRTHLDEAHH
PPA01432
C2H2 ZF
348
370
QECTHCDISFKDKTLYLLHKGLH
PPA01432
C2H2 ZF
376
400
WKCNLCGHNCGDKYMFTTHVISVDH
Links
Other
C2H2 ZF
family TFs
Other
Pristionchus pacificus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm5307
Brugia malayi
Bm5307
N
0.756