CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PPA28875
(
Pristionchus pacificus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PPA28875
T127131_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA28875
C2H2 ZF
189
211
YRCPDCDKIFSCPANLASHRRWH
Links
Other
C2H2 ZF
family TFs
Other
Pristionchus pacificus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DAPPUDRAFT_95880
Daphnia pulex
DAPPUDRAFT_95880
N
0.815
BXY_0217400
Bursaphelenchus xylophilus
BXY_0217400
N
0.815
TRE_0001199601
Trichobilharzia regenti
TRE_0001199601
N
0.815
AEPI009978
Anopheles epiroticus
AEPI009978
N
0.805
AMAM014934
Anopheles maculatus
AMAM014934
N
0.805
HelroG188214
Helobdella robusta
HelroG188214
N
0.767
ENSCING00000018497
Ciona intestinalis
ENSCING00000018497
N
0.757
Smp_172440
Schistosoma mansoni
Smp_172440
N
0.757
A_00742
Schistosoma haematobium
A_00742
N
0.757
SMRZ_0002072301
Schistosoma margrebowiei
SMRZ_0002072301
N
0.757
SMTD_0001873101
Schistosoma mattheei
SMTD_0001873101
N
0.757
SROB_0000287401
Schistosoma rodhaini
SROB_0000287401
N
0.757
T265_10548
Opisthorchis viverrini
T265_10548
N
0.757