CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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V565_020270
(
Rhizoctonia solani
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
V565_020270
T131267_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_258883
M01464_2.00
Schizophyllum commune
NNCCCCTDD
HHAGGGGNN
PBM
Najafabadi et al.(2015a)
pTH10244
0.772
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEP54221
C2H2 ZF
465
490
FTCTVDGCGKCFNRGEHLKRHIRSIH
KEP54221
C2H2 ZF
496
520
HVCPVQKCGKTFSRHDNLCQHMRVH
Links
Other
C2H2 ZF
family TFs
Other
Rhizoctonia solani
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCHCODRAFT_258883
Schizophyllum commune
SCHCODRAFT_258883
D
0.772
PFL1_04904
Pseudozyma flocculosa
PFL1_04904
N
0.762