hbl-1 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00001824 T131557_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in several processes, including negative regulation of transcription by RNA polymerase II; nematode larval development; and oviposition. Located in nucleus. Is expressed in several structures, including body wall musculature; germ line; hypodermis; neurons; and ventral nerve cord. Orthologous to human ZNF131 (zinc finger protein 131); ZNF518A (zinc finger protein 518A); and ZNF518B (zinc finger protein 518B). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
F13D11.2a C2H2 ZF 336 358
F13D11.2a C2H2 ZF 361 384
F13D11.2a C2H2 ZF 567 589
F13D11.2a C2H2 ZF 595 617
F13D11.2a C2H2 ZF 623 647
F13D11.2b C2H2 ZF 314 336
F13D11.2b C2H2 ZF 339 362
F13D11.2b C2H2 ZF 545 567
F13D11.2b C2H2 ZF 573 595
F13D11.2b C2H2 ZF 601 625

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CBG14758 Caenorhabditis briggsae CBG14758 N 0.827
CBN04840 Caenorhabditis brenneri CBN04840 N 0.827
CJA01697 Caenorhabditis japonica CJA01697 N 0.820
scaffold182-EXSNAP2012.34 Pristionchus exspectatus scaffold182-EXSNAP2012.34 N 0.805
Ppa-hbl-1 Pristionchus pacificus PPA26451 N 0.805
nLs.2.1.2.g07756 Litomosoides sigmodontis nLs.2.1.2.g07756 N 0.790
nAv.1.0.1.g08114 Acanthocheilonema viteae nAv.1.0.1.g08114 N 0.790
EEL_0000864301 Elaeophora elaphi EEL_0000864301 N 0.790
L596_g16645 Steinernema carpocapsae L596_g16645 N 0.764
L892_g24741 Steinernema scapterisci L892_g24741 N 0.764