pag-3 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00003909 T131567_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pag-3
M00619_2.00		 Caenorhabditis elegans
NVAATCWSNN
NNSWGATTBN		 PBM
Narasimhan et al.(2015)
pTH9969		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00619_2.00 C2H2 ZF 51 73
M00619_2.00 C2H2 ZF 79 101
M00619_2.00 C2H2 ZF 107 129
M00619_2.00 C2H2 ZF 135 157
M00619_2.00 C2H2 ZF 163 186

DNA Binding Domains

Protein ID Domain From To Sequence
F45B8.4 C2H2 ZF 126 148
F45B8.4 C2H2 ZF 154 176
F45B8.4 C2H2 ZF 182 204
F45B8.4 C2H2 ZF 210 232
F45B8.4 C2H2 ZF 238 261

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN03723 Caenorhabditis brenneri CBN03723 I 0.826
CBG07657 Caenorhabditis briggsae CBG07657 I 0.825
CRE07651 Caenorhabditis remanei CRE07651 I 0.825
CRE15406 Caenorhabditis remanei CRE15406 I 0.825
OESDEN_04286 Oesophagostomum dentatum OESDEN_04286 I 0.793
ANCCAN_06531 Ancylostoma caninum ANCCAN_06531 I 0.789