CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
K11D2.4
(
Caenorhabditis elegans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
WBGene00010770
T131591_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
K11D2.4
M00627_2.00
Caenorhabditis elegans
NNNTTTTTHB
VDAAAAANNN
PBM
Narasimhan et al.(2015)
pTH10797
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00627_2.00
C2H2 ZF
51
72
MKCQYCPKKVNSEAALERHMSE
M00627_2.00
C2H2 ZF
79
101
HECDRCGKRFKARGGLQQHMRIH
M00627_2.00
C2H2 ZF
107
129
YVCTFCAKSFTQKSHLDQHERIH
M00627_2.00
C2H2 ZF
135
157
FLCAFCGRSFRQRSQQIGHESTH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
K11D2.4a
C2H2 ZF
219
240
MKCQYCPKKVNSEAALERHMSE
K11D2.4a
C2H2 ZF
247
269
HECDRCGKRFKARGGLQQHMRIH
K11D2.4a
C2H2 ZF
275
297
YVCTFCAKSFTQKSHLDQHERIH
K11D2.4a
C2H2 ZF
303
325
FLCAFCGRSFRQRSQQIGHESTH
K11D2.4b
C2H2 ZF
79
100
MKCQYCPKKVNSEAALERHMSE
K11D2.4b
C2H2 ZF
107
129
HECDRCGKRFKARGGLQQHMRIH
K11D2.4b
C2H2 ZF
135
157
YVCTFCAKSFTQKSHLDQHERIH
K11D2.4b
C2H2 ZF
163
185
FLCAFCGRSFRQRSQQIGHESTH
K11D2.4c
C2H2 ZF
145
166
MKCQYCPKKVNSEAALERHMSE
K11D2.4c
C2H2 ZF
173
195
HECDRCGKRFKARGGLQQHMRIH
K11D2.4c
C2H2 ZF
201
223
YVCTFCAKSFTQKSHLDQHERIH
K11D2.4c
C2H2 ZF
229
251
FLCAFCGRSFRQRSQQIGHESTH
K11D2.4d
C2H2 ZF
1
22
MKCQYCPKKVNSEAALERHMSE
K11D2.4d
C2H2 ZF
29
51
HECDRCGKRFKARGGLQQHMRIH
K11D2.4d
C2H2 ZF
57
79
YVCTFCAKSFTQKSHLDQHERIH
K11D2.4d
C2H2 ZF
85
107
FLCAFCGRSFRQRSQQIGHESTH
K11D2.4e
C2H2 ZF
207
228
MKCQYCPKKVNSEAALERHMSE
K11D2.4e
C2H2 ZF
235
257
HECDRCGKRFKARGGLQQHMRIH
K11D2.4e
C2H2 ZF
263
285
YVCTFCAKSFTQKSHLDQHERIH
K11D2.4e
C2H2 ZF
291
313
FLCAFCGRSFRQRSQQIGHESTH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis elegans
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG08722
Caenorhabditis briggsae
CBG08722
I
0.784