ztf-6 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00012317 T131601_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-6
M00631_2.00		 Caenorhabditis elegans
NNDCTDDAAN
NTTHHAGHNN		 PBM
Narasimhan et al.(2015)
pTH9958		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00631_2.00 C2H2 ZF 51 75
M00631_2.00 C2H2 ZF 80 102
M00631_2.00 C2H2 ZF 108 129

DNA Binding Domains

Protein ID Domain From To Sequence
W06H12.1 C2H2 ZF 359 383
W06H12.1 C2H2 ZF 388 410
W06H12.1 C2H2 ZF 416 437

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG07957 Caenorhabditis briggsae CBG07957 I 0.811
CBN08888 Caenorhabditis brenneri CBN08888 I 0.811
CBN11039 Caenorhabditis brenneri CBN11039 I 0.811
CJA15462 Caenorhabditis japonica CJA15462 I 0.811
CRE13917 Caenorhabditis remanei CRE13917 I 0.811
CJA37014 Caenorhabditis japonica CJA37014 I 0.805