Y53H1A.2 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00013178 T131607_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Y53H1A.2
M00633_2.00		 Caenorhabditis elegans
NNNNMSRCHN
NDGYSKNNNN		 PBM
Narasimhan et al.(2015)
pTH9934		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00633_2.00 C2H2 ZF 51 73
M00633_2.00 C2H2 ZF 79 100

DNA Binding Domains

Protein ID Domain From To Sequence
Y53H1A.2a C2H2 ZF 140 162
Y53H1A.2a C2H2 ZF 168 189
Y53H1A.2b C2H2 ZF 143 165
Y53H1A.2b C2H2 ZF 171 192

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN01677 Caenorhabditis brenneri CBN01677 I 0.779
CBN13173 Caenorhabditis brenneri CBN13173 I 0.779
CJA15771 Caenorhabditis japonica CJA15771 I 0.776