Afo_R000778 (Aptenodytes forsteri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Afo_R000778 T132739_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zic3
M00151_2.00 		Mus musculus
NCMYVBNRNB
VNYNVBRKGN		 PBM
Badis et al.(2009)
Zic3_3119 		0.782 0.981
ZIC3
M02894_2.00 		Homo sapiens
BACCCCCYGCKGYGH
DCRCMGCRGGGGGTV		 SELEX
Jolma et al.(2013)
ZIC3_1 		0.782 0.981
Zic3
M02936_2.00 		Mus musculus
KRCCCCCYGCTGYGH
DCRCAGCRGGGGGYM		 SELEX
Jolma et al.(2013)
Zic3_1 		0.782 0.981
ZIC3
M04491_2.00 		Homo sapiens
VGACCCCCYGCTGTGM
KCACAGCRGGGGGTCB		 SELEX
Yin et al.(2017)
ZIC3_eDBD_HT-SELEX 		0.782 0.981
ZIC3
M04493_2.00 		Homo sapiens
BACCCCCYGCTGYGH
DCRCAGCRGGGGGTV		 SELEX
Yin et al.(2017)
ZIC3_FL_HT-SELEX 		0.782 0.981
ZIC3
M08902_2.00 		Homo sapiens
NVVYHCCTGCTGDGN
NCHCAGCAGGDRBBN		 Misc
Kulakovskiy et al.(2013)
ZIC3_HUMAN.H11MO.0.B 		0.782 0.981
Zic3
M09013_2.00 		Mus musculus
NVVYHCCTGCTGDGN
NCHCAGCAGGDRBBN		 Misc
Kulakovskiy et al.(2013)
ZIC3_MOUSE.H11MO.0.A 		0.782 0.981
ZIC3
M10229_2.00 		Homo sapiens
VRBCMCCCN
NGGGKGVYB		 Transfac
Matys et al.(2006)
V$ZIC3_01 		0.782 0.981
Zic3
M10359_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZIC3_07 		0.782 0.981
ZIC3
M04492_2.00 		Homo sapiens
NKACCCCCTGCTGTGM
KCACAGCAGGGGGTMN		 SELEX
Yin et al.(2017)
ZIC3_eDBD_Methyl-HT-SELEX 		0.782 0.981
ZIC3
M04494_2.00 		Homo sapiens
BRCCCCCTGCTGTGM
KCACAGCAGGGGGYV		 SELEX
Yin et al.(2017)
ZIC3_FL_Methyl-HT-SELEX 		0.782 0.981
Zic1
M00137_2.00 		Mus musculus
NCMYVBNGNK
MNCNVBRKGN		 PBM
Badis et al.(2009)
Zic1_0991 		0.773 0.916
ZIC1
M02893_2.00 		Homo sapiens
KRCCCCCYGCTGYG
CRCAGCRGGGGGYM		 SELEX
Jolma et al.(2013)
ZIC1_1 		0.773 0.916
ZIC1
M04485_2.00 		Homo sapiens
BVCCMCCYGYHGYGH
DCRCDRCRGGKGGBV		 SELEX
Yin et al.(2017)
ZIC1_eDBD_HT-SELEX 		0.773 0.916
ZIC1
M04487_2.00 		Homo sapiens
BVCCCCCYGCTGYGH
DCRCAGCRGGGGGBV		 SELEX
Yin et al.(2017)
ZIC1_FL_HT-SELEX 		0.773 0.916
ZIC1
M08900_2.00 		Homo sapiens
BMSCHCCCM
KGGGDGSKV		 Misc
Kulakovskiy et al.(2013)
ZIC1_HUMAN.H11MO.0.B 		0.773 0.916
Zic1
M08990_2.00 		Mus musculus
BMSCHCCCM
KGGGDGSKV		 Misc
Kulakovskiy et al.(2013)
ZIC1_MOUSE.H11MO.0.B 		0.773 0.916
ZIC1
M10226_2.00 		Homo sapiens
KRCNMMCYV
BRGKKNGTM		 Transfac
Matys et al.(2006)
V$ZIC1_01 		0.773 0.916
ZIC1
M10227_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZIC1_Q2 		0.773 0.916
ZIC1
M04486_2.00 		Homo sapiens
BACCCCCYRCTGTGM
KCACAGYRGGGGGTV		 SELEX
Yin et al.(2017)
ZIC1_eDBD_Methyl-HT-SELEX 		0.773 0.916
ZIC1
M04488_2.00 		Homo sapiens
BRCCCCCTGCTGTGH
DCACAGCAGGGGGYV		 SELEX
Yin et al.(2017)
ZIC1_FL_Methyl-HT-SELEX 		0.773 0.916
ZIC4
M02912_2.00 		Homo sapiens
KRCCCCCYGYDGNGH
DCNCHRCRGGGGGYM		 SELEX
Jolma et al.(2013)
ZIC4_1 		0.759 0.860
ZIC4
M04566_2.00 		Homo sapiens
BVCMHCMYRYNRYGH
DCRYNRYRKGDKGBV		 SELEX
Yin et al.(2017)
ZIC4_eDBD_HT-SELEX 		0.759 0.860
ZIC4
M04567_2.00 		Homo sapiens
BRCCHCCYRYBGTKH
DMACVRYRGGDGGYV		 SELEX
Yin et al.(2017)
ZIC4_eDBD_Methyl-HT-SELEX 		0.759 0.860
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R000778 C2H2 ZF 88 108
Afo_R000778 C2H2 ZF 117 144
Afo_R000778 C2H2 ZF 150 169
Afo_R000778 C2H2 ZF 180 204
Afo_R000778 C2H2 ZF 210 232

Links

Other C2H2 ZF family TFs
Other Aptenodytes forsteri TFs

175 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004772 Calypte anna Aan_R004772 I 0.792
ENSMEUG00000014290 Macropus eugenii ENSMEUG00000014290 I 0.792
ENSGALG00000006497 Gallus gallus ENSGALG00000006497 I 0.792
ENSAPLG00000010556 Anas platyrhynchos ENSAPLG00000010556 I 0.792
ZIC3 Taeniopygia guttata ENSTGUG00000002155 I 0.792
ENSPSIG00000011896 Pelodiscus sinensis ENSPSIG00000011896 I 0.792
ZIC3 Monodelphis domestica ENSMODG00000014029 I 0.792
ENSFALG00000003772 Ficedula albicollis ENSFALG00000003772 I 0.792
Alligator_sinensis_CCG005717.1 Alligator sinensis Alligator_sinensis_CCG005717.1 I 0.788
ENSLACG00000014597 Latimeria chalumnae ENSLACG00000014597 I 0.787
zic3.S Xenopus laevis XB-GENE-865376 I 0.786
zic3 Xenopus tropicalis XB-GENE-480431 I 0.786
zic3 Takifugu rubripes ENSTRUG00000003550 I 0.783
ENSAMXG00000012325 Astyanax mexicanus ENSAMXG00000012325 I 0.783
ENSMPUG00000001786 Mustela putorius furo ENSMPUG00000001786 I 0.782
Zic3 Mus musculus ENSMUSG00000067860 D 0.782
ZIC3 Felis catus ENSFCAG00000025684 I 0.782
ZIC3 Myotis lucifugus ENSMLUG00000011691 I 0.782
ENSNLEG00000003005 Nomascus leucogenys ENSNLEG00000003005 I 0.782
ZIC3 Gorilla gorilla ENSGGOG00000011914 I 0.782
ZIC3 Homo sapiens ENSG00000156925 D 0.782
ZIC3 Pteropus vampyrus ENSPVAG00000011652 I 0.782
ENSTSYG00000003356 Tarsius syrichta ENSTSYG00000003356 I 0.782
ENSSTOG00000024153 Ictidomys tridecemlineatus ENSSTOG00000024153 I 0.782
ENSP00000287538-D1 Bos grunniens ENSP00000287538-D1 I 0.782
ENSP00000287538 Macaca fascicularis ENSP00000287538 I 0.782
Myotis_brandtii_ZIC3_10005513 Myotis brandtii Myotis_brandtii_ZIC3_10005513 I 0.782
ZIC3 Sus scrofa ENSSSCG00000012705 I 0.782
Zic3 Rattus norvegicus ENSRNOG00000000861 I 0.782
ZIC3 Otolemur garnettii ENSOGAG00000011700 I 0.782
ENSPANG00000011357 Papio anubis ENSPANG00000011357 I 0.782
ENSPPYG00000020775 Pongo abelii ENSPPYG00000020775 I 0.782
ZIC3 Echinops telfairi ENSETEG00000018846 I 0.782
ZIC3 Oryctolagus cuniculus ENSOCUG00000009358 I 0.782
ENSOARG00000010774 Ovis aries ENSOARG00000010774 I 0.782
ZIC3 Equus caballus ENSECAG00000013318 I 0.782
ENSDORG00000014318 Dipodomys ordii ENSDORG00000014318 I 0.782
ZIC3 Dasypus novemcinctus ENSDNOG00000006192 I 0.782
ZIC3 Bos taurus ENSBTAG00000021413 I 0.782
ENSAMEG00000002684 Ailuropoda melanoleuca ENSAMEG00000002684 I 0.782
ENSCPOG00000002374 Cavia porcellus ENSCPOG00000002374 I 0.782
ENSCSAG00000007453 Chlorocebus sabaeus ENSCSAG00000007453 I 0.782
ZIC3 Canis familiaris ENSCAFG00000018979 I 0.782
ZIC3 Callithrix jacchus ENSCJAG00000013792 I 0.782
ENSLOCG00000015155 Lepisosteus oculatus ENSLOCG00000015155 I 0.781
zic3 Gasterosteus aculeatus ENSGACG00000017212 I 0.781
ENSGMOG00000004438 Gadus morhua ENSGMOG00000004438 I 0.779
ENSMICG00000010339 Microcebus murinus ENSMICG00000010339 I 0.778
ENSLACG00000008525 Latimeria chalumnae ENSLACG00000008525 I 0.775
Ogr05309 Ophisaurus gracilis Ogr05309 I 0.774
ENSNLEG00000002407 Nomascus leucogenys ENSNLEG00000002407 I 0.773
ENSFALG00000007094 Ficedula albicollis ENSFALG00000007094 I 0.773
ENSOARG00000005434 Ovis aries ENSOARG00000005434 I 0.773
Gfo_R005436 Geospiza fortis Gfo_R005436 I 0.773
Zic1 Rattus norvegicus ENSRNOG00000014644 I 0.773
ENSCSAG00000011409 Chlorocebus sabaeus ENSCSAG00000011409 I 0.773
ENSMPUG00000011764 Mustela putorius furo ENSMPUG00000011764 I 0.773
ENSSHAG00000015091 Sarcophilus harrisii ENSSHAG00000015091 I 0.773
ZIC1 Anolis carolinensis ENSACAG00000006947 I 0.773
Zic1 Mus musculus ENSMUSG00000032368 D 0.773
Pvit_01479 Pogona vitticeps Pvit_01479 I 0.773
ZIC1 Pan troglodytes ENSPTRG00000015501 I 0.773
ENSAMXG00000010931 Astyanax mexicanus ENSAMXG00000010931 I 0.773
XP_002937379 Xenopus tropicalis XP_002937379 I 0.773
ENSAMEG00000002149 Ailuropoda melanoleuca ENSAMEG00000002149 I 0.773
ENSPANG00000005804 Papio anubis ENSPANG00000005804 I 0.773
Aan_R013349 Calypte anna Aan_R013349 I 0.773
ENSPSIG00000004881 Pelodiscus sinensis ENSPSIG00000004881 I 0.773
ENSPSIG00000005002 Pelodiscus sinensis ENSPSIG00000005002 I 0.773
ZIC1 Sus scrofa ENSSSCG00000011692 I 0.773
ZIC1 Otolemur garnettii ENSOGAG00000007465 I 0.773
Myotis_brandtii_ZIC1_10009541 Myotis brandtii Myotis_brandtii_ZIC1_10009541 I 0.773
ZIC1 Callithrix jacchus ENSCJAG00000001524 I 0.773
Alligator_sinensis_CCG012204.1 Alligator sinensis Alligator_sinensis_CCG012204.1 I 0.773
ENSP00000282928 Macaca fascicularis ENSP00000282928 I 0.773
ENSAPLG00000002960 Anas platyrhynchos ENSAPLG00000002960 I 0.773
zic1 Takifugu rubripes ENSTRUG00000017760 I 0.773
ZIC1 Loxodonta africana ENSLAFG00000030632 I 0.773
zic1 Danio rerio ENSDARG00000015567 I 0.773
ENSGMOG00000001788 Gadus morhua ENSGMOG00000001788 I 0.773
zic1 Gasterosteus aculeatus ENSGACG00000003678 I 0.773
ZIC1 Dasypus novemcinctus ENSDNOG00000047101 I 0.773
ENSGALG00000006811 Gallus gallus ENSGALG00000006811 I 0.773
ZIC1 Gorilla gorilla ENSGGOG00000001101 I 0.773
ZIC1 Tursiops truncatus ENSTTRG00000014350 I 0.773
ZIC1 Taeniopygia guttata ENSTGUG00000008838 I 0.773
ENSLOCG00000007706 Lepisosteus oculatus ENSLOCG00000007706 I 0.773
ZIC1 Microcebus murinus ENSMICG00000014401 I 0.773
ENSSTOG00000000952 Ictidomys tridecemlineatus ENSSTOG00000000952 I 0.773
ZIC1 Felis catus ENSFCAG00000007061 I 0.773
ZIC1 Macaca mulatta ENSMMUG00000004742 I 0.773
ZIC1 Homo sapiens ENSG00000152977 D 0.773
ENSP00000282928-D1 Bos grunniens ENSP00000282928-D1 I 0.773
zic3 Danio rerio ENSDARG00000071497 I 0.773
Cmyd_10020767 Chelonia mydas Cmyd_10020767 I 0.773
ENSXMAG00000013404 Xiphophorus maculatus ENSXMAG00000013404 I 0.771
ENSXMAG00000009164 Xiphophorus maculatus ENSXMAG00000009164 I 0.771
zic1 Tetraodon nigroviridis ENSTNIG00000012758 I 0.771
ENSPFOG00000012982 Poecilia formosa ENSPFOG00000012982 I 0.771
Alligator_sinensis_CCG012205.1 Alligator sinensis Alligator_sinensis_CCG012205.1 I 0.771
Ogr15027 Ophisaurus gracilis Ogr15027 I 0.771
ENSMODG00000021250 Monodelphis domestica ENSMODG00000021250 I 0.771
ENSONIG00000002716 Oreochromis niloticus ENSONIG00000002716 I 0.771
Pvit_01478 Pogona vitticeps Pvit_01478 I 0.771
zic4.L Xenopus laevis XB-GENE-1033019 I 0.771
zic3 Oryzias latipes ENSORLG00000001654 I 0.771
ENSFALG00000007091 Ficedula albicollis ENSFALG00000007091 I 0.771
zic3 Tetraodon nigroviridis ENSTNIG00000016841 I 0.770
ZIC3 Sorex araneus ENSSARG00000012492 I 0.769
ENSMEUG00000009632 Macropus eugenii ENSMEUG00000009632 I 0.769
ZIC1 Bos taurus ENSBTAG00000014751 I 0.769
Ogr15030 Ophisaurus gracilis Ogr15030 I 0.769
zic4 Xenopus tropicalis XB-GENE-1033015 I 0.769
ZIC1 Equus caballus ENSECAG00000020355 I 0.768
ENSTGUG00000008837 Taeniopygia guttata ENSTGUG00000008837 I 0.767
zic4 Danio rerio ENSDARG00000031307 I 0.766
zic1.S Xenopus laevis XB-GENE-864815 I 0.765
zic4 Tetraodon nigroviridis ENSTNIG00000012759 I 0.764
ENSONIG00000005878 Oreochromis niloticus ENSONIG00000005878 I 0.764
ENSPFOG00000014007 Poecilia formosa ENSPFOG00000014007 I 0.764
ENSGMOG00000001798 Gadus morhua ENSGMOG00000001798 I 0.764
zic4 Gasterosteus aculeatus ENSGACG00000003685 I 0.764
ENSXMAG00000009162 Xiphophorus maculatus ENSXMAG00000009162 I 0.764
zic4 Oryzias latipes ENSORLG00000010055 I 0.764
zic4 Takifugu rubripes ENSTRUG00000017765 I 0.764
ENSLOCG00000007717 Lepisosteus oculatus ENSLOCG00000007717 I 0.763
zic1 Oryzias latipes ENSORLG00000010050 I 0.763
Cmyd_10016552 Chelonia mydas Cmyd_10016552 I 0.762
ENSPSIG00000009132 Pelodiscus sinensis ENSPSIG00000009132 I 0.762
ENSAPLG00000003027 Anas platyrhynchos ENSAPLG00000003027 I 0.761
ENSONIG00000005875 Oreochromis niloticus ENSONIG00000005875 I 0.761
ENSPFOG00000013981 Poecilia formosa ENSPFOG00000013981 I 0.761
zic2.L Xenopus laevis XB-GENE-482658 I 0.760
ENSACAG00000003681 Anolis carolinensis ENSACAG00000003681 I 0.760
zic2.S Xenopus laevis XB-GENE-6251643 I 0.760
zic2a Danio rerio ENSDARG00000015554 I 0.760
Ogr17255 Ophisaurus gracilis Ogr17255 I 0.760
Pvit_14047 Pogona vitticeps Pvit_14047 I 0.760
ENSLOCG00000003077 Lepisosteus oculatus ENSLOCG00000003077 I 0.760
ZIC2 Monodelphis domestica ENSMODG00000007718 I 0.760
ENSP00000397695 Macaca fascicularis ENSP00000397695 I 0.759
Myotis_brandtii_Zic4_10009542 Myotis brandtii Myotis_brandtii_Zic4_10009542 I 0.759
ENSAMEG00000002144 Ailuropoda melanoleuca ENSAMEG00000002144 I 0.759
ENSP00000397695-D1 Bos grunniens ENSP00000397695-D1 I 0.759
ENSPPYG00000014188 Pongo abelii ENSPPYG00000014188 I 0.759
Zic4 Mus musculus ENSMUSG00000036972 I 0.759
ENSMPUG00000011767 Mustela putorius furo ENSMPUG00000011767 I 0.759
ENSNLEG00000002375 Nomascus leucogenys ENSNLEG00000002375 I 0.759
ENSCSAG00000011405 Chlorocebus sabaeus ENSCSAG00000011405 I 0.759
ZIC4 Ornithorhynchus anatinus ENSOANG00000007364 I 0.759
ZIC4 Macaca mulatta ENSMMUG00000004741 I 0.759
ZIC4 Microcebus murinus ENSMICG00000014391 I 0.759
ZIC4 Felis catus ENSFCAG00000007059 I 0.759
ZIC4 Equus caballus ENSECAG00000020070 I 0.759
ZIC4 Homo sapiens ENSG00000174963 D 0.759
ZIC4 Gorilla gorilla ENSGGOG00000008924 I 0.759
ZIC4 Dasypus novemcinctus ENSDNOG00000001881 I 0.759
ZIC4 Oryctolagus cuniculus ENSOCUG00000010959 I 0.759
ZIC4 Cavia porcellus ENSCPOG00000010981 I 0.759
ZIC4 Bos taurus ENSBTAG00000014749 I 0.759
ZIC4 Tursiops truncatus ENSTTRG00000014343 I 0.759
ZIC4 Sus scrofa ENSSSCG00000011693 I 0.759
ENSSTOG00000015977 Ictidomys tridecemlineatus ENSSTOG00000015977 I 0.759
ZIC4 Canis familiaris ENSCAFG00000008194 I 0.759
Zic4 Rattus norvegicus ENSRNOG00000014871 I 0.759
ZIC4 Erinaceus europaeus ENSEEUG00000000251 I 0.759
ZIC4 Pteropus vampyrus ENSPVAG00000003870 I 0.759
ZIC4 Pan troglodytes ENSPTRG00000015500 I 0.759
ENSPANG00000024745 Papio anubis ENSPANG00000024745 I 0.759
ENSGALG00000006810 Gallus gallus ENSGALG00000006810 I 0.757
ENSAMXG00000002320 Astyanax mexicanus ENSAMXG00000002320 I 0.757
SMAR005380 Strigamia maritima SMAR005380 I 0.756
estExt_gwp.C_400285 Branchiostoma floridae estExt_gwp.C_400285 I 0.756
ENSAMXG00000010941 Astyanax mexicanus ENSAMXG00000010941 I 0.756
ENSSHAG00000003850 Sarcophilus harrisii ENSSHAG00000003850 I 0.756