CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Afo_R007249
(
Aptenodytes forsteri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Afo_R007249
T132825_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R007249
C2H2 ZF
203
225
FTCEYCNKVFKFKHSLQAHLRIH
Afo_R007249
C2H2 ZF
231
253
YKCSYCSYASAIKANLNVHMRKH
Afo_R007249
C2H2 ZF
258
281
FSCDYCTFTCLSKGHLKVHIERVH
Afo_R007249
C2H2 ZF
287
309
HCRFCKKKYSDVKNLIKHIKETH
Afo_R007249
C2H2 ZF
336
358
YDCHICERKFKNELDRDRHMLVH
Afo_R007249
C2H2 ZF
390
413
YVCSVCLKKFVSSVRLRAHIRDVH
Afo_R007249
C2H2 ZF
678
700
LECEYCGKLFWYQVHYDMHVRTH
Afo_R007249
C2H2 ZF
706
729
YYCSQCSYSSITKNCLKRHVIQKH
Afo_R007249
C2H2 ZF
734
758
LKCPTEHCDYSTPDKYKLQAHLKVH
Afo_R007249
C2H2 ZF
766
789
YSCPVCEKSFSEDRLIKSHIKTNH
Afo_R007249
C2H2 ZF
845
867
FKCSLCEYATRSKSNLKAHMNRH
Afo_R007249
C2H2 ZF
873
895
HLCDMCGKKFKSKGTLKSHKLLH
Afo_R007249
C2H2 ZF
902
924
FKCTVCDYTAAQKPQLLRHMEQH
Afo_R007249
C2H2 ZF
930
953
FRCAHCHYSCNISGSLKRHYNRKH
Afo_R007249
C2H2 ZF
977
1000
IKCPVCSFVYGTKWEFNRHLKNKH
Links
Other
C2H2 ZF
family TFs
Other
Aptenodytes forsteri
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAPLG00000014922
Anas platyrhynchos
ENSAPLG00000014922
N
0.826
ZFAT
Taeniopygia guttata
ENSTGUG00000012603
N
0.826
Gfo_R015793
Geospiza fortis
Gfo_R015793
N
0.826
ENSFALG00000002744
Ficedula albicollis
ENSFALG00000002744
N
0.825
Alligator_sinensis_CCG017129.1
Alligator sinensis
Alligator_sinensis_CCG017129.1
N
0.825
Cmyd_10005734
Chelonia mydas
Cmyd_10005734
N
0.824
ENSPSIG00000004396
Pelodiscus sinensis
ENSPSIG00000004396
N
0.823
Aan_R008477
Calypte anna
Aan_R008477
N
0.810
ENSGALG00000016207
Gallus gallus
ENSGALG00000016207
N
0.808
ZFAT
Meleagris gallopavo
ENSMGAG00000012883
N
0.808
ZFAT
Monodelphis domestica
ENSMODG00000001068
N
0.797