Alligator_sinensis_CCG003489.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG003489.1 T133028_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG003489.1 C2H2 ZF 443 467
Alligator_sinensis_CCG003489.1 C2H2 ZF 473 497
Alligator_sinensis_CCG003489.1 C2H2 ZF 503 525
Alligator_sinensis_CCG003489.1 C2H2 ZF 531 553
Alligator_sinensis_CCG003489.1 C2H2 ZF 561 584

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSGALG00000019836 Gallus gallus ENSGALG00000019836 N 0.824
ZNF692 Meleagris gallopavo ENSMGAG00000000638 N 0.824
Afo_R010193 Aptenodytes forsteri Afo_R010193 N 0.824
Ogr15087 Ophisaurus gracilis Ogr15087 N 0.824
ZNF692 Anolis carolinensis ENSACAG00000011640 N 0.816
ENSAPLG00000015747 Anas platyrhynchos ENSAPLG00000015747 N 0.812
ENSLACG00000004152 Latimeria chalumnae ENSLACG00000004152 N 0.802
ENSFALG00000008357 Ficedula albicollis ENSFALG00000008357 N 0.796
Gfo_R002611 Geospiza fortis Gfo_R002611 N 0.794
znf692 Danio rerio ENSDARG00000078434 N 0.784
ENSMEUG00000013090 Macropus eugenii ENSMEUG00000013090 I 0.767
ZNF692 Monodelphis domestica ENSMODG00000009168 I 0.767
ENSSHAG00000005493 Sarcophilus harrisii ENSSHAG00000005493 I 0.765
ENSLOCG00000010151 Lepisosteus oculatus ENSLOCG00000010151 N 0.760
ZNF692 Ochotona princeps ENSOPRG00000011333 I 0.757