CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG003716.2
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG003716.2
T133039_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG003716.2
C2H2 ZF
205
227
HPCPECRKTFNCPSLLALHKMRH
Alligator_sinensis_CCG003716.2
C2H2 ZF
233
255
HVCTKCRKSFTCLSTLVAHHKTH
Alligator_sinensis_CCG003716.2
C2H2 ZF
261
282
HCFTKCGKSFVYPIDLVKHQHA
Alligator_sinensis_CCG003716.2
C2H2 ZF
289
311
YCCTKCRKSFTLSSNLARHRRVH
Alligator_sinensis_CCG003716.2
C2H2 ZF
317
339
HQCSLCGRRFTQSCHLARHQLTH
Alligator_sinensis_CCG003716.2
C2H2 ZF
345
367
HQCSLCGKRFTLSSSLTRHQRIH
Alligator_sinensis_CCG003716.2
C2H2 ZF
375
395
CSECGKSFTQASHLADHQRIH
Alligator_sinensis_CCG003716.2
C2H2 ZF
401
423
HLCPECGKSFSQSSHLAQHQRIH
Alligator_sinensis_CCG003716.2
C2H2 ZF
429
451
HRCPECGKSFSHSSHLAQHQLIH
Alligator_sinensis_CCG003716.2
C2H2 ZF
457
479
HQCCVCGKGFTQSSSLARHQRIH
Alligator_sinensis_CCG003716.2
C2H2 ZF
486
507
GCLECGKSFTQSCHLARHQLLH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG003716.1
Alligator sinensis
Alligator_sinensis_CCG003716.1
N
0.827