CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004335.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004335.1
T133051_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004335.1
C2H2 ZF
66
87
ICIECGKSFLQSSDLINHRRIH
Alligator_sinensis_CCG004335.1
C2H2 ZF
93
115
YQCLDCGKSFSVSSNLIRHQRTH
Alligator_sinensis_CCG004335.1
C2H2 ZF
121
143
YNCSDCGKNFLDKSTLTQHQHVH
Alligator_sinensis_CCG004335.1
C2H2 ZF
149
170
YTCIDCGKTFSRSTHHRRHLNS
Alligator_sinensis_CCG004335.1
C2H2 ZF
208
229
TCAECWQSFSQNSDLVKHMRIH
Alligator_sinensis_CCG004335.1
C2H2 ZF
235
257
YECPDCGKRFNVSSNLIRHQRIH
Alligator_sinensis_CCG004335.1
C2H2 ZF
263
285
YTCSDCGKSFTDKSTLTQHHRIH
Alligator_sinensis_CCG004335.1
C2H2 ZF
291
313
YICTYCGKSFSHSSHHKRHEKIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10002141
Chelonia mydas
Cmyd_10002141
N
0.774