CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004576.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004576.1
T133090_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004576.1
C2H2 ZF
121
143
TICNDCGKSFRVSSNLVQHQRIH
Alligator_sinensis_CCG004576.1
C2H2 ZF
149
171
FGCAVCGGSFRQRSHLIQHQRIH
Alligator_sinensis_CCG004576.1
C2H2 ZF
177
199
FACTDCGKKFSMSSKLIRHQIIH
Alligator_sinensis_CCG004576.1
C2H2 ZF
205
227
YKCSDCGKSFTGNSQLIQHQRIH
Alligator_sinensis_CCG004576.1
C2H2 ZF
233
255
YECHNCGKSFSVSSALIRHQRIH
Alligator_sinensis_CCG004576.1
C2H2 ZF
261
283
YECSDCGKSFSQSSELMKHQRVH
Alligator_sinensis_CCG004576.1
C2H2 ZF
289
311
YECAQCGKSFTVSSALIQHRRFH
Alligator_sinensis_CCG004576.1
C2H2 ZF
317
339
YGCAECGKSFTVSSHLIQHRRFH
Alligator_sinensis_CCG004576.1
C2H2 ZF
345
367
YECMACGKSFLWRSALLRHQRVH
Alligator_sinensis_CCG004576.1
C2H2 ZF
373
395
YACTECGESFRQSAHLIQHRRVH
Alligator_sinensis_CCG004576.1
C2H2 ZF
401
423
YACADCGKGFTVSSALIRHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Brh_R006549
Buceros rhinoceros
Brh_R006549
N
0.761