Alligator_sinensis_CCG008633.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG008633.1 T133226_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG008633.1 C2H2 ZF 395 417
Alligator_sinensis_CCG008633.1 C2H2 ZF 427 449
Alligator_sinensis_CCG008633.1 C2H2 ZF 459 481
Alligator_sinensis_CCG008633.1 C2H2 ZF 490 513
Alligator_sinensis_CCG008633.1 C2H2 ZF 519 541
Alligator_sinensis_CCG008633.1 C2H2 ZF 547 570
Alligator_sinensis_CCG008633.1 C2H2 ZF 576 598
Alligator_sinensis_CCG008633.1 C2H2 ZF 604 627
Alligator_sinensis_CCG008633.1 C2H2 ZF 633 655
Alligator_sinensis_CCG008633.1 C2H2 ZF 690 712
Alligator_sinensis_CCG008633.1 C2H2 ZF 718 741
Alligator_sinensis_CCG008633.1 C2H2 ZF 747 770

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPSIG00000016052 Pelodiscus sinensis ENSPSIG00000016052 N 0.806
Aan_R006099 Calypte anna Aan_R006099 N 0.793
ENSAPLG00000011089 Anas platyrhynchos ENSAPLG00000011089 N 0.784
ENSGALG00000016327 Gallus gallus ENSGALG00000016327 N 0.776
ENSFALG00000004127 Ficedula albicollis ENSFALG00000004127 N 0.774
ENSTGUG00000007219 Taeniopygia guttata ENSTGUG00000007219 N 0.774
Afo_R007602 Aptenodytes forsteri Afo_R007602 N 0.774
Brh_R004406 Buceros rhinoceros Brh_R004406 N 0.774
Gfo_R003736 Geospiza fortis Gfo_R003736 N 0.774
Tal_R003082 Tyto alba Tal_R003082 N 0.774