CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Alligator_sinensis_CCG014332.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG014332.1
T133319_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG014332.1
C2H2 ZF
263
285
HKCEDCGKEFTHTGNFKRHIRIH
Alligator_sinensis_CCG014332.1
C2H2 ZF
291
313
FSCRECNKAFSDPAACKAHEKTH
Alligator_sinensis_CCG014332.1
C2H2 ZF
348
370
YRCDDCGKLFTTSGNLKRHQLVH
Alligator_sinensis_CCG014332.1
C2H2 ZF
376
398
YQCDYCGRSFSDPTSKMRHLETH
Alligator_sinensis_CCG014332.1
C2H2 ZF
404
426
HKCPHCDKKFNQVGNLKAHLKIH
Alligator_sinensis_CCG014332.1
C2H2 ZF
432
454
LKCRECGKQFTTSGNLKRHLRIH
Alligator_sinensis_CCG014332.1
C2H2 ZF
460
482
YVCVHCQRQFADPGALQRHVRIH
Alligator_sinensis_CCG014332.1
C2H2 ZF
488
510
CQCLICGKAFTQASSLIAHVRQH
Alligator_sinensis_CCG014332.1
C2H2 ZF
516
538
YVCERCGKRFVQSSQLANHIRHH
Alligator_sinensis_CCG014332.1
C2H2 ZF
544
566
HKCTVCNKAFVNVGDLSKHIIIH
Alligator_sinensis_CCG014332.1
C2H2 ZF
572
595
FLCDKCGRGFNRVDNLRSHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPSIG00000008926
Pelodiscus sinensis
ENSPSIG00000008926
N
0.826