CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG015762.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG015762.1
T133346_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG015762.1
C2H2 ZF
357
379
YHCGDCGKAFLQLCHLKKHRFVH
Alligator_sinensis_CCG015762.1
C2H2 ZF
385
407
FLCTECGRSYSSEESFKAHVLFH
Alligator_sinensis_CCG015762.1
C2H2 ZF
413
435
FQCKQCEKAYGTKRDLREHEVLH
Alligator_sinensis_CCG015762.1
C2H2 ZF
441
463
FTCEECGKTFARRPSLRIHRKIH
Alligator_sinensis_CCG015762.1
C2H2 ZF
476
498
CECAICERRLANPGSLRNHMRLH
Alligator_sinensis_CCG015762.1
C2H2 ZF
504
526
FVCPYCGRDFRQQGNLRGHLRLH
Alligator_sinensis_CCG015762.1
C2H2 ZF
532
554
YKCRFCGDAFPQIPELRRHLISH
Alligator_sinensis_CCG015762.1
C2H2 ZF
559
581
HLCTVCGKALKDPHTLRAHERLH
Alligator_sinensis_CCG015762.1
C2H2 ZF
587
609
FKCEQCGKAYTLATKLRRHQKSH
Alligator_sinensis_CCG015762.1
C2H2 ZF
615
637
YKCDICGMGYTLLQSLTRHKITH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPSIG00000004921
Pelodiscus sinensis
ENSPSIG00000004921
N
0.793
Cmyd_10004335
Chelonia mydas
Cmyd_10004335
N
0.791