CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cflo_08652--XP_001120631.1_APIME
(
Camponotus floridanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cflo_08652--XP_001120631.1_APIME
T133836_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cflo_08652--XP_001120631.1_APIME
C2H2 ZF
406
428
KTCDECGKQYRTNYKLQEHMRKH
Cflo_08652--XP_001120631.1_APIME
C2H2 ZF
434
456
FQCTTCEKAFRSKIGLAQHTATH
Cflo_08652--XP_001120631.1_APIME
C2H2 ZF
462
484
FNCSTCGKGFQCKSYLIVHQRVH
Cflo_08652--XP_001120631.1_APIME
C2H2 ZF
490
512
YPCMTCGQNFKTKQSLLDHENRH
Cflo_08652--XP_001120631.1_APIME
C2H2 ZF
518
540
YMCEICGRGFITKGLCKSHQKIH
Cflo_08652--XP_001120631.1_APIME
C2H2 ZF
548
570
YPCAVCNKMFVSKSYLNTHLRIH
Cflo_08652--XP_001120631.1_APIME
C2H2 ZF
576
598
YLCEVCGKGFLTRVDLKIHSTMH
Cflo_08652--XP_001120631.1_APIME
C2H2 ZF
604
626
FKCEICGKVFARRAALRCHRRSH
Cflo_08652--XP_001120631.1_APIME
C2H2 ZF
632
654
YRCDVCNKTFTQFSPMAIHKRLH
Cflo_08652--XP_001120631.1_APIME
C2H2 ZF
660
683
YKCDACGKGFVSRSTMMCHRKKHH
Links
Other
C2H2 ZF
family TFs
Other
Camponotus floridanus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SINV18669
Solenopsis invicta
SINV18669
N
0.789
ACEP18012
Atta cephalotes
ACEP18012
N
0.785
NV21465
Nasonia vitripennis
NV21465
N
0.764
GB50491
Apis mellifera
GB50491
N
0.762