CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10001312
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10001312
T134068_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10001312
C2H2 ZF
138
160
FRCQDCGKSFIWASHLERHRRIH
Cmyd_10001312
C2H2 ZF
166
188
FRCPECGESYSQSSHLLQHRRTH
Cmyd_10001312
C2H2 ZF
194
216
HKCGDCGKRFAQPDELAAHQQGH
Cmyd_10001312
C2H2 ZF
222
244
HKCSHCGKGFIWASHLERHRRIH
Cmyd_10001312
C2H2 ZF
250
272
FKCPECGESFSQSSHLAKHRRSH
Cmyd_10001312
C2H2 ZF
278
300
YRCPHCGKSFCQSSDLARHKRIH
Cmyd_10001312
C2H2 ZF
306
328
LRCGDCGKCFRAGPALARHQRSH
Cmyd_10001312
C2H2 ZF
334
356
HRCGDCGKGFVWASHLERHRRVH
Cmyd_10001312
C2H2 ZF
362
384
FPCTSCGERFAQKAHLLQHRKTH
Cmyd_10001312
C2H2 ZF
390
412
YKCGDCGKRFGDNAAFLAHQQGH
Cmyd_10001312
C2H2 ZF
418
440
YKCSDCGKGFAWVSHLERHRRIH
Cmyd_10001312
C2H2 ZF
446
468
FKCPECGESFSQSSHLTKHQRSH
Cmyd_10001312
C2H2 ZF
474
496
YKCSECGKAFGLTLDLIIHQRTH
Cmyd_10001312
C2H2 ZF
502
524
YKCSQCRKGFTRRANLIKHQRSH
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG003485.1
Alligator sinensis
Alligator_sinensis_CCG003485.1
N
0.773