CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10002139
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10002139
T134144_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10002139
C2H2 ZF
51
72
LCSECGKSFLHSSDLVNHQRIH
Cmyd_10002139
C2H2 ZF
78
100
FICTDCGKSFRQSSTLITHQRIH
Cmyd_10002139
C2H2 ZF
106
128
YECSYCGKSFRVSSNFVRHQRIH
Cmyd_10002139
C2H2 ZF
134
156
YKCPICGKSFTDKSTLTQHQRTH
Cmyd_10002139
C2H2 ZF
162
183
YKCADCGKSFSRSSHRKRHLRN
Cmyd_10002139
C2H2 ZF
221
242
TCAECWQSFSQNSDLVKHMRIH
Cmyd_10002139
C2H2 ZF
248
270
FKCTHCGKRFSVSSNLTRHQRIH
Cmyd_10002139
C2H2 ZF
276
298
YKCPDCGKSFTDKSTLTQHQRIH
Cmyd_10002139
C2H2 ZF
304
326
YICIYCGKSFSRSSHHKRHERTH
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG004337.1
Alligator sinensis
Alligator_sinensis_CCG004337.1
N
0.822