CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10002171
(
Chelonia mydas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Cmyd_10002171
T134156_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10002171
C2H2 ZF
121
143
YECGECGKTFSCSSHFSKHRRTH
Cmyd_10002171
C2H2 ZF
149
171
FCCLHCGKSFNVSSNLYRHQRAH
Cmyd_10002171
C2H2 ZF
204
226
YKCEECGKSFRRNTELVTHQRLH
Cmyd_10002171
C2H2 ZF
232
254
FQCTHCGKSFSWSSHFDRHQRIH
Cmyd_10002171
C2H2 ZF
260
282
YQCPECGKCFSRSSHLYRHQRTH
Cmyd_10002171
C2H2 ZF
288
310
YICTYCGRSFNSTLHFDRHQRTH
Cmyd_10002171
C2H2 ZF
316
338
YKCTLCGKGFGDGLALVKHQRLH
Cmyd_10002171
C2H2 ZF
344
367
FHCEECGKSFGARAQYARHRRSLH
Cmyd_10002171
C2H2 ZF
380
402
YRCGDCGKSFSWSSHWERHQRIH
Cmyd_10002171
C2H2 ZF
408
430
YQCGDCGKRFGRTSHLYRHQRTH
Cmyd_10002171
C2H2 ZF
436
458
HVCADCGKSFNSTLHFHKHRRAH
Cmyd_10002171
C2H2 ZF
465
487
HACPDCGKAFADGSALAKHRRTH
Cmyd_10002171
C2H2 ZF
493
515
FPCPQCGRRFSVSSHLYRHLRSH
Links
Other
C2H2 ZF
family TFs
Other
Chelonia mydas
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG004986.1
Alligator sinensis
Alligator_sinensis_CCG004986.1
N
0.800