CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R006215
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R006215
T135732_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R006215
C2H2 ZF
6
28
FKCSECGKAFNQKGALQTHMIKH
Gfo_R006215
C2H2 ZF
34
57
HACAFCPAAFSQKGNLQSHIQRVH
Gfo_R006215
C2H2 ZF
67
89
HVCPYCSKEFKKPSDLVRHIRIH
Gfo_R006215
C2H2 ZF
95
117
YKCPQCFRAFAVKSTLTAHIKTH
Gfo_R006215
C2H2 ZF
123
145
FKCQFCMKSFSTSGSLKVHIRLH
Gfo_R006215
C2H2 ZF
151
173
FKCSQCGRGFVSAGVLKAHIRTH
Gfo_R006215
C2H2 ZF
179
201
FKCVVCNGAFTTGGSLRRHMGIH
Gfo_R006215
C2H2 ZF
207
229
YMCPYCQKTFKTSLNCKKHMKTH
Gfo_R006215
C2H2 ZF
229
251
HRCEYCNKGFKKSSHLKQHVRSH
Gfo_R006215
C2H2 ZF
257
279
YKCQLCGRGFVSSGVLKSHEKTH
Gfo_R006215
C2H2 ZF
287
308
CCSYCPKSFKKPSDLVRHVRIH
Gfo_R006215
C2H2 ZF
314
336
YKCDECGKSFTVKSTLDCHVKTH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R005279
Calypte anna
Aan_R005279
N
0.824