CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R006221
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R006221
T135735_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R006221
C2H2 ZF
27
49
FTCHLCDRSFTEKWALKNHMKLH
Gfo_R006221
C2H2 ZF
55
79
FKCTWPTCHYSFLTASAMKDHFRTH
Gfo_R006221
C2H2 ZF
85
107
FLCDLCGFAGGTRHALTKHRRQH
Gfo_R006221
C2H2 ZF
113
135
FKCDECNFASTTQSHLTRHKRVH
Gfo_R006221
C2H2 ZF
172
195
YNCPRCDYGTNIPVEFRNHLKELH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSTGUG00000009118
Taeniopygia guttata
ENSTGUG00000009118
N
0.827
Aan_R005283
Calypte anna
Aan_R005283
N
0.817
ENSCPOG00000026737
Cavia porcellus
ENSCPOG00000026737
N
0.816
ENSLACG00000017829
Latimeria chalumnae
ENSLACG00000017829
N
0.802
ENSACAG00000023951
Anolis carolinensis
ENSACAG00000023951
N
0.801