CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ogr04942
(
Ophisaurus gracilis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ogr04942
T136586_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr04942
C2H2 ZF
67
91
YCCPQLHCGKAFASKYKLYRHLATH
Ogr04942
C2H2 ZF
97
119
HQCMYCEKMFHRKDHLRNHLQTH
Ogr04942
C2H2 ZF
126
148
LHCPECGKTYNTKLGYRRHLAMH
Ogr04942
C2H2 ZF
190
212
HPCDHCDRRFYTRKDVRRHLVVH
Ogr04942
C2H2 ZF
218
241
FLCQYCAQRFGRKDHLTRHMKKSH
Links
Other
C2H2 ZF
family TFs
Other
Ophisaurus gracilis
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PLAGL2
Anolis carolinensis
ENSACAG00000008743
N
0.827
ENSFALG00000005449
Ficedula albicollis
ENSFALG00000005449
N
0.818
ENSMEUG00000001198
Macropus eugenii
ENSMEUG00000001198
N
0.818
PLAGL2
Monodelphis domestica
ENSMODG00000019464
N
0.818
ENSPSIG00000004000
Pelodiscus sinensis
ENSPSIG00000004000
N
0.818
ENSSHAG00000011174
Sarcophilus harrisii
ENSSHAG00000011174
N
0.818
PLAGL2
Taeniopygia guttata
ENSTGUG00000006525
N
0.818
Afo_R011128
Aptenodytes forsteri
Afo_R011128
N
0.818
Alligator_sinensis_CCG000339.1
Alligator sinensis
Alligator_sinensis_CCG000339.1
N
0.818
Brh_R004704
Buceros rhinoceros
Brh_R004704
N
0.818
Gfo_R005319
Geospiza fortis
Gfo_R005319
N
0.818
Pvit_11206
Pogona vitticeps
Pvit_11206
N
0.818
Tal_R000481
Tyto alba
Tal_R000481
N
0.818
Aan_R015690
Calypte anna
Aan_R015690
N
0.813
ENSAPLG00000005061
Anas platyrhynchos
ENSAPLG00000005061
N
0.810
PLAGL2
Gallus gallus
ENSGALG00000006586
N
0.810
PLAGL2
Meleagris gallopavo
ENSMGAG00000007476
N
0.810
Cmyd_10009540
Chelonia mydas
Cmyd_10009540
N
0.808
ENSGMOG00000018396
Gadus morhua
ENSGMOG00000018396
N
0.772
ENSMEUG00000015507
Macropus eugenii
ENSMEUG00000015507
N
0.758
PLAGL1
Monodelphis domestica
ENSMODG00000017250
N
0.758
ENSSHAG00000015101
Sarcophilus harrisii
ENSSHAG00000015101
N
0.758