CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm002012
(
Prunus mume
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pm002012
T136788_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm002012
C2H2 ZF
226
248
YSCNRCNKKSFSVVADLKSHLKH
Pm002012
C2H2 ZF
249
278
CGEARWRCTCGTSFSRKSKLFGHMALFEGH
Links
Other
C2H2 ZF
family TFs
Other
Prunus mume
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000314572
Malus domestica
MDP0000314572
N
0.827
PRUPE_ppa008361mg
Prunus persica
PRUPE_ppa008361mg
N
0.803
gene16285-v1.0-hybrid
Fragaria vesca
gene16285-v1.0-hybrid
N
0.803