CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_00620
(
Pogona vitticeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pvit_00620
T136851_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_00620
C2H2 ZF
213
235
HLCIECGKSFTRPSDLAKHLNVH
Pvit_00620
C2H2 ZF
241
263
YLCVECGKSFSQLSHLTRHQKIH
Pvit_00620
C2H2 ZF
269
291
HICSECGDTFSQRAYLVSHQRSH
Pvit_00620
C2H2 ZF
297
319
YRCSYCQKCFSHQSALKIHERNH
Pvit_00620
C2H2 ZF
325
347
YACTDCGKRFVSSSSLTTHRRIH
Pvit_00620
C2H2 ZF
353
375
HACGVCGKRFIQHSNLVSHQRTH
Pvit_00620
C2H2 ZF
381
403
FSCKVCGRRFAYPSDLTRHQKIH
Pvit_00620
C2H2 ZF
409
431
YPCEECERRFTRLSDLITHQRIH
Pvit_00620
C2H2 ZF
437
459
YHCLECGRRFRQRGVLVKHQKCH
Links
Other
C2H2 ZF
family TFs
Other
Pogona vitticeps
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSACAG00000005304
Anolis carolinensis
ENSACAG00000005304
N
0.811