CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_02872
(
Pogona vitticeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pvit_02872
T136922_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_02872
C2H2 ZF
61
83
YQCLECGCVLLSPDELLAHQEVH
Pvit_02872
C2H2 ZF
103
125
YQCSECNELFPSTALWLAHRQMH
Pvit_02872
C2H2 ZF
244
266
FCCKECKQVFGTGEALWQHQQEH
Pvit_02872
C2H2 ZF
273
295
FLCGECQRGFTTAKRLLAHQRVH
Pvit_02872
C2H2 ZF
300
322
YECPNCNKIFKKAASLEQHMRIH
Pvit_02872
C2H2 ZF
328
350
YLCMDCGLGFSTEMTLIMHRKSH
Pvit_02872
C2H2 ZF
429
452
FLCPQCGKAFSTYIRMVRHKRVVH
Pvit_02872
C2H2 ZF
458
480
HKCPTCGKKFKKLVHVRNHLRTH
Pvit_02872
C2H2 ZF
486
508
FQCSECGKTFVSQANLARHHVTH
Pvit_02872
C2H2 ZF
514
536
YQCQVCNKRFTQSSNLRQHRLLH
Pvit_02872
C2H2 ZF
545
567
HSCKDCGAAFARAHQLALHRTVH
Pvit_02872
C2H2 ZF
573
595
FPCPECDKSFPRRRLLELHRLSH
Pvit_02872
C2H2 ZF
601
622
HRCPDCGALFVMASKLQEHRCA
Pvit_02872
C2H2 ZF
661
683
YSCPLCGKAFTTPSGLSRHQQRH
Pvit_02872
C2H2 ZF
689
711
HKCPVCAKTFVAASGLQLHQRIH
Pvit_02872
C2H2 ZF
717
739
FPCPDCGKAFRQATHLREHRRLH
Pvit_02872
C2H2 ZF
745
767
YRCPECGKAFVQSMHLAEHRRIH
Pvit_02872
C2H2 ZF
773
795
HPCPHCPKTFKTLSNLRSHRKTH
Links
Other
C2H2 ZF
family TFs
Other
Pogona vitticeps
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ogr10278
Ophisaurus gracilis
Ogr10278
N
0.785