CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_03125
(
Pogona vitticeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pvit_03125
T136939_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_03125
C2H2 ZF
6
28
HTCPYCGKGFRRNSHLTRHMATH
Pvit_03125
C2H2 ZF
51
73
YSCNYCGKTFARSAHLARHQETH
Pvit_03125
C2H2 ZF
79
101
YKCTYCGKAFGRNSHLTRHHSTH
Pvit_03125
C2H2 ZF
107
129
YECGVCGKAFTRSAHVTRHQGIH
Pvit_03125
C2H2 ZF
135
157
FRCTHCGKRFTRSAHLQRHQGIH
Pvit_03125
C2H2 ZF
163
185
FSCRDCGKGFTRNAHLERHRATH
Pvit_03125
C2H2 ZF
191
213
FKCASCGKGFGAASHLVRHQRTH
Pvit_03125
C2H2 ZF
226
248
HPCSDCGKSFGVSSHLTIHRRTH
Pvit_03125
C2H2 ZF
254
276
YECNECGKRFSQSSTLVLHRRIH
Pvit_03125
C2H2 ZF
282
304
YKCTSCEKCFSVSSHLTKHQRVH
Pvit_03125
C2H2 ZF
310
332
YECQACGKRFSQSSTLILHQRIH
Pvit_03125
C2H2 ZF
338
360
YKCDECGKTFSVSSHLTIHQRIH
Pvit_03125
C2H2 ZF
366
388
YRCTECGKCFRQRSGLSTHQKTH
Links
Other
C2H2 ZF
family TFs
Other
Pogona vitticeps
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSACAG00000010664
Anolis carolinensis
ENSACAG00000010664
N
0.809