CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_16548
(
Pogona vitticeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pvit_16548
T137457_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_16548
C2H2 ZF
280
302
FSCQLCPFVTTYPNHLARHMKTH
Pvit_16548
C2H2 ZF
308
330
FACALCPYASAHLDNLKRHQRVH
Pvit_16548
C2H2 ZF
336
358
YKCPLCPYACGNLANLKRHGRIH
Pvit_16548
C2H2 ZF
364
386
FRCRLCSYSCNQSMNLKRHMLRH
Pvit_16548
C2H2 ZF
392
414
FQCRVCPYTTGHWDNYKRHQKVH
Links
Other
C2H2 ZF
family TFs
Other
Pogona vitticeps
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gfo_R001028
Geospiza fortis
Gfo_R001028
N
0.794
ZNF513
Erinaceus europaeus
ENSEEUG00000008819
N
0.787