CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_19291
(
Pogona vitticeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pvit_19291
T137555_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_19291
C2H2 ZF
400
421
QCSVCGAELPDNETVEQHRNLH
Pvit_19291
C2H2 ZF
456
478
FVCDHCGAQFSKEEALETHRQTH
Pvit_19291
C2H2 ZF
486
507
FCLLCGKRFQTQTALQQHMEVH
Pvit_19291
C2H2 ZF
513
535
YICSECNRTFPSHTALKRHLRSH
Pvit_19291
C2H2 ZF
541
563
YECEFCGSCFRDESTLKGHKRIH
Pvit_19291
C2H2 ZF
569
591
YECNGCGKKFSLKHQLETHYRVH
Pvit_19291
C2H2 ZF
597
619
FECKLCHQRSRDYSAMIKHLRTH
Pvit_19291
C2H2 ZF
625
647
YQCTICLEYCPSLSAMQKHMKGH
Links
Other
C2H2 ZF
family TFs
Other
Pogona vitticeps
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAPLG00000002963
Anas platyrhynchos
ENSAPLG00000002963
N
0.794
ENSPSIG00000006603
Pelodiscus sinensis
ENSPSIG00000006603
N
0.777
ENSGALG00000007011
Gallus gallus
ENSGALG00000007011
N
0.767
ZBTB16
Meleagris gallopavo
ENSMGAG00000002967
N
0.767
ENSFALG00000010031
Ficedula albicollis
ENSFALG00000010031
N
0.765
Afo_R004259
Aptenodytes forsteri
Afo_R004259
N
0.765
Aan_R001400
Calypte anna
Aan_R001400
N
0.759