CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
29761.m000413
(
Ricinus communis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
29761.m000413
T137779_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29761.m000413
C2H2 ZF
199
221
ECPQCHARFSSVTTLVEHVQKLH
29761.m000413
C2H2 ZF
236
259
DVCPKCSKGFRDPVALVEHVERDH
Links
Other
C2H2 ZF
family TFs
Other
Ricinus communis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_024711
Theobroma cacao
TCM_024711
N
0.811
Ciclev10005558m.g
Citrus clementina
Ciclev10005558m.g
N
0.773
orange1.1g023000m.g
Citrus sinensis
orange1.1g023000m.g
N
0.773