CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw.11.868.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw.11.868.1
T138017_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.11.868.1
C2H2 ZF
7
29
FLCQQCGYRTAKSSHLADHMKTH
e_gw.11.868.1
C2H2 ZF
35
57
YKCDQCDFCTAWKQNLKQHVAKH
e_gw.11.868.1
C2H2 ZF
63
85
HVCKECGYQTLKKSHFSEHMRTH
e_gw.11.868.1
C2H2 ZF
91
113
FKCAQCEFSTSWHKNFKQHMAKH
e_gw.11.868.1
C2H2 ZF
119
141
YTCSECDYKTADSSGLRRHLRTH
e_gw.11.868.1
C2H2 ZF
147
169
HICRECGFMCTERSKLLIHKRTH
e_gw.11.868.1
C2H2 ZF
175
197
YKCTQCEYSGAVKQHLDIHMLKH
e_gw.11.868.1
C2H2 ZF
203
225
YMCGECGHRTNDKSSLARHMRTH
e_gw.11.868.1
C2H2 ZF
231
254
YKCYQCDYAAAQKCGLDKHMRAKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_pg.scaffold_266000027
Branchiostoma floridae
fgenesh2_pg.scaffold_266000027
N
0.827