CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh1_pg.C_chr_4.10468
(
Pichia stipitis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_pg.C_chr_4.10468
T138540_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_chr_4.10468
C2H2 ZF
429
450
RCRICNKQFKRPSSLQTHYYSH
estExt_fgenesh1_pg.C_chr_4.10468
C2H2 ZF
456
480
FKCPWPGCGRLFSVKSNMTRHYRLH
Links
Other
C2H2 ZF
family TFs
Other
Pichia stipitis
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CaO19.217
Candida albicans
CaO19.217
N
0.827
CaO19.7849
Candida albicans
CaO19.7849
N
0.827
CD36_23070
Candida dubliniensis
CD36_23070
N
0.827
PICST_67626
Scheffersomyces stipitis
PICST_67626
N
0.827
CPAG_02311
Candida parapsilosis
CPAG_02311
N
0.826
CTRG_01953
Candida tropicalis
CTRG_01953
N
0.826
PGUG_01805
Candida guilliermondii
PGUG_01805
N
0.812
PGUG_01805
Meyerozyma guilliermondii
PGUG_01805
N
0.812
LELG_02546
Lodderomyces elongisporus
LELG_02546
N
0.804
CORT_0C02650
Candida orthopsilosis
CORT_0C02650
N
0.802
CANTEDRAFT_113303
Candida tenuis
CANTEDRAFT_113303
N
0.785
G210_5934
Candida maltosa
G210_5934
N
0.783
KUCA_T00003370001
Kuraishia capsulata
KUCA_T00003370001
N
0.761