CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pm.C_chr_6.10158
(
Pichia stipitis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_pm.C_chr_6.10158
T138563_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_chr_6.10158
C2H2 ZF
408
426
CNKQFSRPYDLIRHQETIH
estExt_fgenesh1_pm.C_chr_6.10158
C2H2 ZF
433
468
FRCVICEGRANGGPGNGKLKTFSRGDALSRHIKVKH
Links
Other
C2H2 ZF
family TFs
Other
Pichia stipitis
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CLUG_01409
Candida lusitaniae
CLUG_01409
N
0.827
CANTEDRAFT_93460
Candida tenuis
CANTEDRAFT_93460
N
0.827
CLUG_01409
Clavispora lusitaniae
CLUG_01409
N
0.827
DEHA2D12848g
Debaryomyces hansenii
DEHA2D12848g
N
0.827
PICST_65910
Scheffersomyces stipitis
PICST_65910
N
0.827
AACERI_AaceriAER227W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAER227W
N
0.811
AGOS_AER227W
Ashbya gossypii
AGOS_AER227W
N
0.811
Kwal_14227
Kluyveromyces waltii
Kwal_14227
N
0.811
CaO19.1069
Candida albicans
CaO19.1069
N
0.808
CaO19.8671
Candida albicans
CaO19.8671
N
0.808
CD36_04080
Candida dubliniensis
CD36_04080
N
0.808
CTRG_04724
Candida tropicalis
CTRG_04724
N
0.808
G210_2794
Candida maltosa
G210_2794
N
0.808
PGUG_04806
Candida guilliermondii
PGUG_04806
N
0.797
PGUG_04806
Meyerozyma guilliermondii
PGUG_04806
N
0.797
SPAPADRAFT_58147
Spathaspora passalidarum
SPAPADRAFT_58147
N
0.797
GNLVRS01_PISO0K02298g
Millerozyma farinosa
GNLVRS01_PISO0K02298g
N
0.787
GNLVRS01_PISO0L02299g
Millerozyma farinosa
GNLVRS01_PISO0L02299g
N
0.787
KLLA0_C04103g
Kluyveromyces lactis
KLLA0_C04103g
N
0.782
KUCA_T00004059001
Kuraishia capsulata
KUCA_T00004059001
N
0.777
LELG_01672
Lodderomyces elongisporus
LELG_01672
N
0.768
BN7_5024
Wickerhamomyces ciferrii
BN7_5024
N
0.766
SAKL0C07612g
Lachancea kluyveri
SAKL0C07612g
N
0.766