CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_Genewise1Plus.C_11496
(
Cochliobolus heterostrophus C5
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_Genewise1Plus.C_11496
T138861_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_11496
C2H2 ZF
11
38
FKCTYKDCNMSFDTEKQMRSHKKHSDEH
estExt_Genewise1Plus.C_11496
C2H2 ZF
40
60
YCHKCDEDFESFEDYAMHKIT
estExt_Genewise1Plus.C_11496
C2H2 ZF
68
90
ACRVCGDEFKSISGLKRHIELNH
estExt_Genewise1Plus.C_11496
C2H2 ZF
288
312
YHCPFICEQTFDCVGDLNKHILGEH
estExt_Genewise1Plus.C_11496
C2H2 ZF
317
335
MKCPKCLKYFNSATALMSH
Links
Other
C2H2 ZF
family TFs
Other
Cochliobolus heterostrophus C5
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_36968
Bipolaris maydis
COCC4DRAFT_36968
N
0.827
COCSADRAFT_345742
Bipolaris sorokiniana
COCSADRAFT_345742
N
0.823