CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_gwp.C_3460070
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_gwp.C_3460070
T138923_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_gwp.C_3460070
C2H2 ZF
48
71
YKCTHCAAVYDHVNLLKAHVQSAH
estExt_gwp.C_3460070
C2H2 ZF
76
99
FKCPICPMAFKAIPNIRVHILNTH
estExt_gwp.C_3460070
C2H2 ZF
110
132
YKCPLCDTVFTQTTLLSTHLDTH
estExt_gwp.C_3460070
C2H2 ZF
144
164
FRCLECHKSFDSKETFLQHMQ
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_GenewiseH_1.C_3460027
Branchiostoma floridae
estExt_GenewiseH_1.C_3460027
N
0.827