CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_32_chr11_3_0000114
(
Nectria haematococca
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh1_pg.sca_32_chr11_3_0000114
T139034_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_32_chr11_3_0000114
C2H2 ZF
351
375
LQCVEPGCGQAFNHPHKLKHHQRYH
fgenesh1_pg.sca_32_chr11_3_0000114
C2H2 ZF
379
404
HKCPYPNCAKGFGTRTHLQRHINDRH
fgenesh1_pg.sca_32_chr11_3_0000114
C2H2 ZF
410
441
LYCSVPECDYSRQGGKGFPRKDNWQRHMLRAH
Links
Other
C2H2 ZF
family TFs
Other
Nectria haematococca
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG86719
Fusarium solani
NechaG86719
N
0.827