CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.6.498.1
(
Sporobolomyces roseus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw1.6.498.1
T140099_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.6.498.1
C2H2 ZF
22
44
FSCDVCGKTFSESLTLTQHMRVH
gw1.6.498.1
C2H2 ZF
50
74
YACDHPGCNKTFALASALTIHKRTH
gw1.6.498.1
C2H2 ZF
80
104
FICPHPGCSAAFAESSNLSKHIRTH
gw1.6.498.1
C2H2 ZF
110
134
YICDEVGCGKAFGRSDQLKRHRKTH
Links
Other
C2H2 ZF
family TFs
Other
Sporobolomyces roseus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RHTO_02703
Rhodosporidium toruloides
RHTO_02703
N
0.759