CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.429.27.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.429.27.1
T140182_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.429.27.1
C2H2 ZF
4
26
FPCPYCTVSCANNGQLKGHLRVH
gw.429.27.1
C2H2 ZF
32
56
YPCDHPGCGRAFARNEELTRHRRIH
gw.429.27.1
C2H2 ZF
62
84
YPCTECGKAFSRKDHLTKHAKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_pg.C_600097
Branchiostoma floridae
estExt_fgenesh2_pg.C_600097
N
0.827
e_gw.338.31.1
Branchiostoma floridae
e_gw.338.31.1
N
0.823
fgenesh2_pg.scaffold_381000032
Branchiostoma floridae
fgenesh2_pg.scaffold_381000032
N
0.823
gw.381.75.1
Branchiostoma floridae
gw.381.75.1
N
0.823