CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ocbimv22002425m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22002425m.g
T140412_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22002425m.p
C2H2 ZF
198
219
RCDQCNRVFSCKSDLTTHLRSH
Ocbimv22002425m.p
C2H2 ZF
225
247
YQCIHCLKTFAYGFRLKIHIRSH
Ocbimv22002425m.p
C2H2 ZF
253
275
YQCTFCAKTFTTNSNLKIHTRTH
Ocbimv22002425m.p
C2H2 ZF
281
303
YHCNHCPRTFARPDTLQEHTRTH
Ocbimv22002425m.p
C2H2 ZF
309
331
YECAYCDRTFAVSSHLNVHLRRH
Ocbimv22002425m.p
C2H2 ZF
337
359
YQCPTCELSFISSSRLRVHRRVH
Ocbimv22002425m.p
C2H2 ZF
365
387
YSCPHCCKCFSHKTTLQGHIRTH
Ocbimv22002425m.p
C2H2 ZF
393
415
FTCVYCSRTFSRQDILGLHLKSH
Ocbimv22002425m.p
C2H2 ZF
421
443
FKCLHCPKNFTNRSLLRRHIRIH
Ocbimv22002425m.p
C2H2 ZF
449
471
FHCEACPKMFTNSFNLKVHMRTH
Ocbimv22002425m.p
C2H2 ZF
477
499
YKCDQCGKEFSRQDTLKKHTKTH
Ocbimv22002426m.p
C2H2 ZF
198
219
RCDQCNRVFSCKSDLTTHLRSH
Ocbimv22002426m.p
C2H2 ZF
225
247
YQCIHCLKTFAYGFRLKIHIRSH
Ocbimv22002426m.p
C2H2 ZF
253
275
YQCTFCAKTFTTNSNLKIHTRTH
Ocbimv22002426m.p
C2H2 ZF
281
303
YHCNHCPRTFARPDTLQEHTRTH
Ocbimv22002426m.p
C2H2 ZF
309
331
YECAYCDRTFAVSSHLNVHLRRH
Ocbimv22002426m.p
C2H2 ZF
337
359
YQCPTCELSFISSSRLRVHRRVH
Ocbimv22002426m.p
C2H2 ZF
365
387
YSCPHCCKCFSHKTTLQGHIRTH
Ocbimv22002426m.p
C2H2 ZF
393
415
FTCVYCSRTFSRQDILGLHLKSH
Ocbimv22002426m.p
C2H2 ZF
421
443
FKCLHCPKNFTNRSLLRRHIRIH
Ocbimv22002426m.p
C2H2 ZF
449
471
FHCEACPKMFTNSFNLKVHMRTH
Ocbimv22002426m.p
C2H2 ZF
477
499
YKCDQCGKEFSRQDTLKKHTKTH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action