CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22004827m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22004827m.g
T140502_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22004827m.p
C2H2 ZF
224
246
YSCDICLKQFTRRNTLQLHQRIH
Ocbimv22004827m.p
C2H2 ZF
252
274
FTCTYCAKQFVHRDKFQIHERIH
Ocbimv22004827m.p
C2H2 ZF
280
302
FSCGYCSKCFSRKDKLKIHESSH
Ocbimv22004827m.p
C2H2 ZF
308
330
YHCSYCPKQFVQRDKLKIHERIH
Ocbimv22004827m.p
C2H2 ZF
336
358
YSCEFCPKQFARGDKLQLHRRIH
Ocbimv22004827m.p
C2H2 ZF
364
386
LQCSYCPKPFVQKDKLIIHERTH
Ocbimv22004827m.p
C2H2 ZF
392
414
FHCEVCTKQFARSDRLQIHRRTH
Ocbimv22004827m.p
C2H2 ZF
420
442
FHCDLCPKQFIQRCYLNIHRRIH
Ocbimv22004827m.p
C2H2 ZF
448
470
FQCDTCQKQFARKDKLQIHIRSH
Ocbimv22004827m.p
C2H2 ZF
476
499
YGCNLCSEMFMRKPQLISHKKHAH
Ocbimv22004827m.p
C2H2 ZF
513
535
FFCDTCTKPYSTINELQMHRKIH
Ocbimv22004828m.p
C2H2 ZF
224
246
YSCDICLKQFTRRNTLQLHQRIH
Ocbimv22004828m.p
C2H2 ZF
252
274
FTCTYCAKQFVHRDKFQIHERIH
Ocbimv22004828m.p
C2H2 ZF
280
302
FSCGYCSKCFSRKDKLKIHESSH
Ocbimv22004828m.p
C2H2 ZF
308
330
YHCSYCPKQFVQRDKLKIHERIH
Ocbimv22004828m.p
C2H2 ZF
336
358
YSCEFCPKQFARGDKLQLHRRIH
Ocbimv22004828m.p
C2H2 ZF
364
386
LQCSYCPKPFVQKDKLIIHERTH
Ocbimv22004828m.p
C2H2 ZF
392
414
FHCEVCTKQFARSDRLQIHRRTH
Ocbimv22004828m.p
C2H2 ZF
420
442
FHCDLCPKQFIQRCYLNIHRRIH
Ocbimv22004828m.p
C2H2 ZF
448
470
FQCDTCQKQFARKDKLQIHIRSH
Ocbimv22004828m.p
C2H2 ZF
476
499
YGCNLCSEMFMRKPQLISHKKHAH
Ocbimv22004828m.p
C2H2 ZF
513
535
FFCDTCTKPYSTINELQMHRKIH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action