CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22004830m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22004830m.g
T140503_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22004830m.p
C2H2 ZF
176
198
FECAFCKKVFTKQFALRVHEQVH
Ocbimv22004830m.p
C2H2 ZF
204
226
YSCNICNKSFAQQIHLRNHQRVH
Ocbimv22004830m.p
C2H2 ZF
232
254
FQCTICNKAFSQAGNLKLHLRIH
Ocbimv22004830m.p
C2H2 ZF
260
282
FTCDICSKAFSQRNSLNDHKRFH
Ocbimv22004830m.p
C2H2 ZF
287
309
FFCKFCKRAFCNQFFLENHERSH
Ocbimv22004830m.p
C2H2 ZF
315
337
FTCDYCGKLFAQRGNFRTHLRIH
Ocbimv22004830m.p
C2H2 ZF
343
365
FICEVCGKAFSQRNSLNDHNRLH
Ocbimv22004830m.p
C2H2 ZF
370
392
FFCQYCKKAFCNQFFLKIHERIH
Ocbimv22004830m.p
C2H2 ZF
397
419
FYCTFCKKGFCNEFFLRNHERVH
Ocbimv22004830m.p
C2H2 ZF
425
447
YDCQFCNKTFAQRGNLKTHLRIH
Ocbimv22004830m.p
C2H2 ZF
453
475
FICDICDKAFSQRNNLNDHKRLH
Ocbimv22004830m.p
C2H2 ZF
480
502
YFCSFCKKAFCNQFFLKTHERTH
Ocbimv22004830m.p
C2H2 ZF
508
530
FECEFCHEKFSQQGNLKTHLRTH
Ocbimv22004830m.p
C2H2 ZF
536
556
FACGQCGKNFAQKANLNNHKC
Ocbimv22004831m.p
C2H2 ZF
176
198
FECAFCKKVFTKQFALRVHEQVH
Ocbimv22004831m.p
C2H2 ZF
204
226
YSCNICNKSFAQQIHLRNHQRVH
Ocbimv22004831m.p
C2H2 ZF
232
254
FQCTICNKAFSQAGNLKLHLRIH
Ocbimv22004831m.p
C2H2 ZF
260
282
FTCDICSKAFSQRNSLNDHKRFH
Ocbimv22004831m.p
C2H2 ZF
287
309
FFCKFCKRAFCNQFFLENHERSH
Ocbimv22004831m.p
C2H2 ZF
315
337
FTCDYCGKLFAQRGNFRTHLRIH
Ocbimv22004831m.p
C2H2 ZF
343
365
FICEVCGKAFSQRNSLNDHNRLH
Ocbimv22004831m.p
C2H2 ZF
370
392
FFCQYCKKAFCNQFFLKIHERIH
Ocbimv22004831m.p
C2H2 ZF
397
419
FYCTFCKKGFCNEFFLRNHERVH
Ocbimv22004831m.p
C2H2 ZF
425
447
YDCQFCNKTFAQRGNLKTHLRIH
Ocbimv22004831m.p
C2H2 ZF
453
475
FICDICDKAFSQRNNLNDHKRLH
Ocbimv22004831m.p
C2H2 ZF
480
502
YFCSFCKKAFCNQFFLKTHERTH
Ocbimv22004831m.p
C2H2 ZF
508
530
FECEFCHEKFSQQGNLKTHLRTH
Ocbimv22004831m.p
C2H2 ZF
536
556
FACGQCGKNFAQKANLNNHKC
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action