CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22005709m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22005709m.g
T140517_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22005709m.p
C2H2 ZF
30
52
YRCELCQRSFREVATLRKHEQLH
Ocbimv22005709m.p
C2H2 ZF
58
80
YVCQTCGKSFLWSSNLKVHERVH
Ocbimv22005709m.p
C2H2 ZF
86
109
YKCKICHRCFTQSNDLRRHERNVH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LotgiG133765
Lottia gigantea
LotgiG133765
N
0.820
CGI_10020951
Crassostrea gigas
CGI_10020951
N
0.807