CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22008859m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22008859m.g
T140732_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22008858m.p
C2H2 ZF
57
79
YQCKECGRNFTRNNSLYRHQLIH
Ocbimv22008858m.p
C2H2 ZF
85
107
YHCDICGRMFSQENSLHRHKYIH
Ocbimv22008858m.p
C2H2 ZF
113
135
YQCDICGKRYTGNSDLSWHKRTH
Ocbimv22008858m.p
C2H2 ZF
141
163
YCCDVCGKSFTGNSDLSRHKRIH
Ocbimv22008858m.p
C2H2 ZF
169
191
YQCEICDKTFSTSSHLYRHIRIH
Ocbimv22008858m.p
C2H2 ZF
198
220
YQCNICGQTFSISANLSRHIRIH
Ocbimv22008858m.p
C2H2 ZF
226
248
YQCDICGKAFSRKYVLFSHKNSH
Ocbimv22008858m.p
C2H2 ZF
254
276
YHCNICGKMFSYSTGLNSHKQTH
Ocbimv22008858m.p
C2H2 ZF
310
332
YCCDVCGKSFSVNSNLCSHKRTH
Ocbimv22008858m.p
C2H2 ZF
338
360
YHCDICDKTFSRSSSLSTHKRFH
Ocbimv22008858m.p
C2H2 ZF
366
388
YHCNICGKSFFAASGLYFHKRTH
Ocbimv22008858m.p
C2H2 ZF
394
416
HHCEICGKTFSMSYSLSNHKRTH
Ocbimv22008858m.p
C2H2 ZF
422
444
YHCGDCGKTFTYNSSLYRHKRIH
Ocbimv22008859m.p
C2H2 ZF
57
79
YQCKECGRNFTRNNSLYRHQLIH
Ocbimv22008859m.p
C2H2 ZF
85
107
YHCDICGRMFSQENSLHRHKYIH
Ocbimv22008859m.p
C2H2 ZF
113
135
YQCDICGKRYTGNSDLSWHKRTH
Ocbimv22008859m.p
C2H2 ZF
141
163
YCCDVCGKSFTGNSDLSRHKRIH
Ocbimv22008859m.p
C2H2 ZF
169
191
YQCEICDKTFSTSSHLYRHIRIH
Ocbimv22008859m.p
C2H2 ZF
198
220
YQCNICGQTFSISANLSRHIRIH
Ocbimv22008859m.p
C2H2 ZF
226
248
YQCDICGKAFSRKYVLFSHKNSH
Ocbimv22008859m.p
C2H2 ZF
254
276
YHCNICGKMFSYSTGLNSHKQTH
Ocbimv22008859m.p
C2H2 ZF
310
332
YCCDVCGKSFSVNSNLCSHKRTH
Ocbimv22008859m.p
C2H2 ZF
338
360
YHCDICDKTFSRSSSLSTHKRFH
Ocbimv22008859m.p
C2H2 ZF
366
388
YHCNICGKSFFAASGLYFHKRTH
Ocbimv22008859m.p
C2H2 ZF
394
416
HHCEICGKTFSMSYSLSNHKRTH
Ocbimv22008859m.p
C2H2 ZF
422
444
YHCGDCGKTFTYNSSLYRHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action