CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22028207m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22028207m.g
T141701_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22028207m.p
C2H2 ZF
377
400
LACQICLDKTFTASATLMYHYRSH
Ocbimv22028207m.p
C2H2 ZF
406
428
FVCLLCSTTFTRQHSLNYHMLIH
Ocbimv22028207m.p
C2H2 ZF
434
456
FTCKDCGRKFRHPSHFKEHLRRH
Ocbimv22028207m.p
C2H2 ZF
462
485
FECKDCPQKFKTRNTYKRHLKTRH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ocbimv22007920m.g
Octopus bimaculoides
Ocbimv22007920m.g
N
0.815
CGI_10028629
Crassostrea gigas
CGI_10028629
N
0.795
SMAR003031
Strigamia maritima
SMAR003031
N
0.784