CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22032435m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22032435m.g
T141786_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22032435m.p
C2H2 ZF
144
167
FPCSHCRYVTDRRNNLKRHISTMH
Ocbimv22032435m.p
C2H2 ZF
177
196
CGVTFSTKASLREHITIFHH
Ocbimv22032435m.p
C2H2 ZF
199
221
YSCPFCGRRFCRKALLRRHLSVH
Ocbimv22032435m.p
C2H2 ZF
227
249
YNCPHCDYATSHKSNLERHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LotgiG98806
Lottia gigantea
LotgiG98806
N
0.798
BGLB007585
Biomphalaria glabrata
BGLB007585
N
0.798
CGI_10009456
Crassostrea gigas
CGI_10009456
N
0.775
BGLB008808
Biomphalaria glabrata
BGLB008808
N
0.760
LotgiG97874
Lottia gigantea
LotgiG97874
N
0.759
CGI_10010460
Crassostrea gigas
CGI_10010460
N
0.757
Ocbimv22030634m.g
Octopus bimaculoides
Ocbimv22030634m.g
N
0.757