CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30033290m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30033290m.g
T142423_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23921584_peptide
C2H2 ZF
338
359
YACERCGKVFAYRYYRDKHLKY
23921584_peptide
C2H2 ZF
370
393
FPCHLCTRSFEKRDRLRIHILHVH
23921584_peptide
C2H2 ZF
399
421
HKCTVCGKCFSQSSSLNKHMRVH
23921584_peptide
C2H2 ZF
427
449
YKCVYCSKAFTASSILRTHIRQH
23921584_peptide
C2H2 ZF
455
478
FKCKHCGKAFASHAAHDSHVRRTH
23921584_peptide
C2H2 ZF
484
506
CVCTVCGKAFTQSYELKFHMNMH
23921584_peptide
C2H2 ZF
512
530
YQCKKCGRGFSSPSSRDRH
23921585_peptide
C2H2 ZF
336
357
YACERCGKVFAYRYYRDKHLKY
23921585_peptide
C2H2 ZF
368
391
FPCHLCTRSFEKRDRLRIHILHVH
23921585_peptide
C2H2 ZF
397
419
HKCTVCGKCFSQSSSLNKHMRVH
23921585_peptide
C2H2 ZF
425
447
YKCVYCSKAFTASSILRTHIRQH
23921585_peptide
C2H2 ZF
453
476
FKCKHCGKAFASHAAHDSHVRRTH
23921585_peptide
C2H2 ZF
482
504
CVCTVCGKAFTQSYELKFHMNMH
23921585_peptide
C2H2 ZF
510
528
YQCKKCGRGFSSPSSRDRH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action